PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000130400
Common NameWRKY17
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family WRKY
Protein Properties Length: 280aa    MW: 30525.6 Da    PI: 10.4718
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000130400genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86e-30204262259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver++++p+++++tYe eH+h+
  MDP0000130400 204 ADEFTWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAQDNPTMLVVTYEAEHHHP 262
                    69************************9888****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.2E-15159201IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.807.4E-31189264IPR003657WRKY domain
PROSITE profilePS5081130.94198264IPR003657WRKY domain
SuperFamilySSF1182907.98E-26201264IPR003657WRKY domain
SMARTSM007743.4E-34203263IPR003657WRKY domain
PfamPF031061.4E-25205262IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MAVDLVGFSK IDDRTAMQEA ASAGLQSMEH LIRALSNHPP SQTPLDCREI TDFTVTKFKQ  60
LISVLNRTGH ARFRRGPANP PSDPVHPKPQ TTLTVLQTPQ SDKDSSTALS PPLSTTSSFL  120
SSITIGDGSV SNGKAFSSIS VPPAPAFSAG KPPLPQSHRK RCHDGETAKR SSSGHCHCSK  180
RRKSKVKRTM RVPAVSSKIA DIPADEFTWR KYGQKPIKGS PYPRGYYKCS TVRGCPARKH  240
VERAQDNPTM LVVTYEAEHH HPHPSITAAN VGLVFQSSKE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-20191264274WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.271680.0cell culture
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009359965.10.0PREDICTED: probable WRKY transcription factor 11
SwissprotQ9SV151e-105WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLD9ZJF60.0D9ZJF6_MALDO; WRKY domain class transcription factor
STRINGVIT_04s0069g00920.t011e-116(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13143498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.14e-60WRKY DNA-binding protein 11